Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme68919g00001 CAGGCAATTAAGGCAAGTGTTGTTCGTCAAATAACGGAGGCAAAGACGTTACTTTCTAGATCAGATGACAATTCTGAGGCATTAGCTTTGATCATTGATGGGAAATCTCTTGCTTATGCGCTAGAAGACGATGTAAAGAACTTGTTTCTTGAACTTGCAATTGGTTGCGCATCTGTTATATGCTGTCGTTCGTCTCCAAAGCAAAAAGCACTTGTTACTAGATTGGTTAAGATGAGACCTGGTAGTACAACTCTAGCTATTGGAGATGGTGCAAATGATGTTGGTATGCTCCAAGAAGCAGATATTGGAATCGGTATCAGTGGTGTCGAAGGAATGCAGGCAGTTATGTCAAGTGATATTGCCATTGCTCAATTTCGATATCTCGAACGCTTACTTCTTATATGTTACTTCTTCTACAAGAATATCACCTTCGGCTTCACGTTGTTCTTCTACGAGATGTATACCTCATTCTCCGGCCAAGCTGCATACAATGACTG 497 0.4105 QAIKASVVRQITEAKTLLSRSDDNSEALALIIDGKSLAYALEDDVKNLFLELAIGCASVICCRSSPKQKALVTRLVKMRPGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRYLERLLLICYFFYKNITFGFTLFFYEMYTSFSGQAAYND 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme68919g00001 165 Gene3D - 2 127 IPR023214 -
Trme68919g00001 165 SUPERFAMILY HAD-like 9 133 IPR036412 -
Trme68919g00001 165 NCBIfam HAD-IC family P-type ATPase 53 156 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Trme68919g00001 165 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 20 165 - -
Trme68919g00001 165 Pfam haloacid dehalogenase-like hydrolase 80 105 - -
Trme68919g00001 165 Pfam Phospholipid-translocating P-type ATPase C-terminal 115 165 IPR032630 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme68919g00001 Trme-Chr68919 41 828 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme68919g00001 2 165 Primary Pumps ATPases AT1G26130 75.706 2.75e-83 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme68919g00001 K01530 - gmx:100796405 281.567