Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme68888g00001 GAATCAGCAAAGACTAATGAAATTAAGGATGTTCCACAAGGAAGTCAAGTCTCTAGGAGAGGTAGCCGCTCTACCAGAAAGAAGTTGCTTGAAGCTGTTGATCTTAAGTGCAAACTGGTGGATTTTGGCAATGCTTGTTGGACGTATAAACAATTTACAAATGATATTCAGACTAGGCAGTATAGATGTCCTGAGGTTCTTCTTGGTTCTAAATACTCAACTCCAGCCGATATGTGGTCCTTTGCTTGCATTTGCTTTGAGCTTGCCACTGGCGATGTTCTTTTTGATCCTCACAGTGGTGATAACTATGACAGGGATGAGGAATTTAAAATGCATGTGAAAAATAAGAAACATTGA 357 0.3978 ESAKTNEIKDVPQGSQVSRRGSRSTRKKLLEAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADMWSFACICFELATGDVLFDPHSGDNYDRDEEFKMHVKNKKH 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme68888g00001 118 FunFam Os03g0748400 protein 23 107 - -
Trme68888g00001 118 Gene3D Transferase(Phosphotransferase) domain 1 31 108 - -
Trme68888g00001 118 MobiDBLite consensus disorder prediction 1 20 - -
Trme68888g00001 118 ProSiteProfiles Protein kinase domain profile. 1 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme68888g00001 118 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 5 108 - -
Trme68888g00001 118 Pfam Protein kinase domain 34 103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme68888g00001 118 SUPERFAMILY Protein kinase-like (PK-like) 33 105 IPR011009 -
Trme68888g00001 118 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme68888g00001 Trme-Chr68888 3 446 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme68888g00001 2 108 EF-hand Containing Proteins AT5G22840 76.636 2.65e-56 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Trme68888g00001 Pkinase 1.2e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme68888g00001 K08832 - gmx:100791829 202.216