Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme688280g00001 ATGAGTCCACGCGGCTACTCAAGATTGGGGCGCAATGCAGATGCATCTGCAGCGCTATTCAAATATGGTGTAGTAGATATTGAATACAAAAGAGTTCCATGTATGTACAGTGGCTATAATATAGTGGCTCAAGTCCATGAACGCAGCAAAAACCCAGATTACTTTGCTGTTGTGGTTCTCTATGTAGATGGAATGTATGATGTCAAT 207 0.4155 MSPRGYSRLGRNADASAALFKYGVVDIEYKRVPCMYSGYNIVAQVHERSKNPDYFAVVVLYVDGMYDVN 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme688280g00001 69 PANTHER EXPANSIN-B3 3 68 - -
Trme688280g00001 69 Gene3D - 33 69 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme688280g00001 Trme-Chr688280 1 207 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme688280g00001 1 68 Expansin Gene Family AT4G17030 47.059 1.14e-19 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme688280g00001 - - psat:127135298 133.65