Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme687380g00001 GAAGGGTTGGAATCAATTGTTGATGTTGGTGGTGGAACAGGAACAACTGCTAAGATTATTTGTGAGAAATTTCCTAAGTTGAAATGTGTTGTGTTTGACAGGCCAAAGGTTGTTGAGAATTTATCTGAAAGTGACAGTTTGACTTATGTTGGTGGGGATATGTTCACATCTATTCCTAAAGCTGATGCTGTTCTGCTTAAG 201 0.3831 EGLESIVDVGGGTGTTAKIICEKFPKLKCVVFDRPKVVENLSESDSLTYVGGDMFTSIPKADAVLLK 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme687380g00001 67 Pfam O-methyltransferase domain 1 67 IPR001077 GO:0008171
Trme687380g00001 67 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 67 IPR016461 GO:0008168
Trme687380g00001 67 PANTHER O-METHYLTRANSFERASE 3 66 IPR016461 GO:0008168
Trme687380g00001 67 Gene3D Vaccinia Virus protein VP39 1 67 IPR029063 -
Trme687380g00001 67 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 66 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme687380g00001 Trme-Chr687380 52 252 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme687380g00001 1 67 Monolignol Biosynthesis Gene Families AT5G54160 52.239 1.48e-19 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme687380g00001 - K22588 ag:AAC49926 122.864