Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme6864g00001 ATGGAATGGATGGTTATACGGATTGAGGCACTTCAAAGTTTGACGGTTGTCACTGCAGCTTTGTTTCTTATTATACTTCCTCATGGATATGTGTCCCCAGGACTTGTGGGACTGTCTCTTTTTTATGCTTTTAATTTAACGGGAGCCCAAATATTTTGTACTCGATGGTTTTCTAACTTATCAAACCACGTAATTTCTGTTGAAAGAATCAAGCAATTCATTCACATTCCAGCCGAGCCTCCTGCCATTGTGGAGGATAACCGGCCGCCATCATCATGGCCTTCCAAGGGTAGGATTGAAGTTCAAGGCTTAGAGATTAGATATCGTCCTGACGCTCCATTAGTCCTTAAGGGAATCACTTGTACATTTAAAGAAGGGAGTAGGGTCGGAGTTGTTGGAAGGACTGGAAGTGGAAAAAGTACACTTATAAGTGCTTTGTTTCGCTTAGTTGATCCTTCAAGAGGTGACATTCTCATAGATGGGATTAATATATGCTCAATCGGGTTGAAGGATTTGAGAATGAAGCTAAGCATCATTCCTCAAGAACCAACACTTTTCAAGGGCAGCATTAGGACAAACCTGGACCCTCTAGGCCTATACTCGGATGACGAAATATGGAAGGCTTTGGAGAAATGTCACCTGAAGGAAACAATCAGCAGGCTACCAAGTCTCTTGGACTCTTCTGTGAGTGATGAAGGTGGAAATTGGAGCTTAGGACAGCGCCAACTGTTTTGTCTGGGAAGGGTACTACTTAAGAGGAACAGAATTCTAGTTCTAGATGAAGCTACTGCCTCCATTGACTCTGCGACAGATTCCATTCTACAAAAAGTAATTAGACAAGAATTTGCAGAATGCACGGTTATAACCGTTGCTCACCGAATTCCAACTGTAATAGATAGTGACATGGTCATGGTCCTATCTTACGGGAAACTAGTGGAATATGACGAGCCTTCAAAGCTAATGGACACCAACTCTTCATTCTCTAAGCTAGTAGCTGAATATTG 1004 0.4233 MEWMVIRIEALQSLTVVTAALFLIILPHGYVSPGLVGLSLFYAFNLTGAQIFCTRWFSNLSNHVISVERIKQFIHIPAEPPAIVEDNRPPSSWPSKGRIEVQGLEIRYRPDAPLVLKGITCTFKEGSRVGVVGRTGSGKSTLISALFRLVDPSRGDILIDGINICSIGLKDLRMKLSIIPQEPTLFKGSIRTNLDPLGLYSDDEIWKALEKCHLKETISRLPSLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDSILQKVIRQEFAECTVITVAHRIPTVIDSDMVMVLSYGKLVEYDEPSKLMDTNSSFSKLVAEY 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme6864g00001 334 FunFam ABC transporter C family member 3 82 333 - -
Trme6864g00001 334 SMART AAA_5 125 310 IPR003593 GO:0016887
Trme6864g00001 334 CDD ABCC_MRP_domain2 97 317 - -
Trme6864g00001 334 Gene3D ABC transporter type 1, transmembrane domain 1 80 IPR036640 GO:0005524|GO:0016020
Trme6864g00001 334 Pfam ABC transporter 116 264 IPR003439 GO:0005524
Trme6864g00001 334 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 331 IPR027417 -
Trme6864g00001 334 Gene3D - 82 333 IPR027417 -
Trme6864g00001 334 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 101 333 IPR003439 GO:0005524
Trme6864g00001 334 SUPERFAMILY ABC transporter transmembrane region 3 81 IPR036640 GO:0005524|GO:0016020
Trme6864g00001 334 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme6864g00001 Trme-Chr6864 390 1906 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme6864g00001 97 331 Calmodulin-binding Proteins AT2G36910 32.780 1.30e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme6864g00001 - - vvo:131595584 599.356