Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme686039g00001 ATGGAGAGGGATTTGGAAGAGTTGAAGAAGTTTCCTCAGTATTTTGGGTTTAGTTTGGAGAAGAGGATTGTTCCAAGGCATTTGCATTTGAAGGAAAGAGGTGTTAGGATTCCTTTGAATAGAATGTTGATGTGGGGTGATGACAAATTCTATGCAAAGTGGAA 164 0.3902 MERDLEELKKFPQYFGFSLEKRIVPRHLHLKERGVRIPLNRMLMWGDDKFYAKW 54
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme686039g00001 54 Gene3D Transcription termination factor 3, mitochondrial 1 54 IPR038538 -
Trme686039g00001 54 Pfam mTERF 1 50 IPR003690 GO:0003690|GO:0006355
Trme686039g00001 54 SMART mt_12 5 36 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme686039g00001 Trme-Chr686039 12 175 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trme686039g00001 mTERF 2.9e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme686039g00001 K15031 - gmx:121172859 108.997