Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme68586g00001 ACGGTTTCCTCTTCGAGTTCAGGAATAAGCAAAGGTGCATTGGTTGGAATTGTCTTAGCTTCTAAGAGCTCAATAAAAATTGATGGTGTAAGAACATTCAATTATGAAGAAATGGCTTTGGCTACGAACAATTTTAGCCAATCTGCTCAAGTTGGACAAGGCGGGTATGGGAAGGTTTATAAAGGAAATCTACCTGATGGAACTGTTGTTGCCATTAAACGTGCGCAAGAAGGTTCGCTACAAGGTGAGAAGGAGTTTCTTACAGAAATACAACTGTTATCGAGGTTACATCATCGCAACCTTGTGTCTCTCATTGGATATTGTGATGAAGATGGTGAACAGAACAAGTAG 351 0.4017 TVSSSSSGISKGALVGIVLASKSSIKIDGVRTFNYEEMALATNNFSQSAQVGQGGYGKVYKGNLPDGTVVAIKRAQEGSLQGEKEFLTEIQLLSRLHHRNLVSLIGYCDEDGEQNK 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme68586g00001 116 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 27 113 - -
Trme68586g00001 116 ProSitePatterns Protein kinases ATP-binding region signature. 51 73 IPR017441 GO:0005524
Trme68586g00001 116 FunFam Leucine-rich repeat protein kinase family protein 17 115 - -
Trme68586g00001 116 Pfam Protein kinase domain 46 111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme68586g00001 116 Gene3D Phosphorylase Kinase; domain 1 16 115 - -
Trme68586g00001 116 ProSiteProfiles Protein kinase domain profile. 45 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme68586g00001 116 SUPERFAMILY Protein kinase-like (PK-like) 26 112 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme68586g00001 Trme-Chr68586 86 791 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme68586g00001 22 114 Receptor kinase-like Gene Family AT5G01950 69.892 2.63e-40 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Trme68586g00001 Pkinase 1.4e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme68586g00001 - - gmx:100777308 169.859