Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trme68510g00001 | GTTGCCAATTACTGCCAGCAACATCTTCATTCAGTTTTGGTTGAGGAGATAGAAGCTGCAGAATCAAGTTTATCTGAAAATAATGAAAAGGAAAATTGGCAGGACCAATGGAAGAAAGTACTCACCAATTGCTTTCAAAAAGTAGATGATAAAATCGTAGGAGTTAATGCAGATAATGGTGGAAGTAACAGTAATGACGGATCTGRGTCAARTACTGAAGAAACTCTTGCTCCCGAGTGTGCTGGATCCACTGCACTTGTTGCAGTTTTGACTCAAACCCATATAATAATTGCGAATTGCGGTGATTCAAGAGCGGTCTTGTGTCGAGGAAAAGAAGCACTTCCATTGTCTACTGACCATAAAGTAAGGCATTTGTTTCTAGTTTCAGAAATTGTTTGCTGGACTTAG | 408 | 0.3922 | VANYCQQHLHSVLVEEIEAAESSLSENNEKENWQDQWKKVLTNCFQKVDDKIVGVNADNGGSNSNDGSXSXTEETLAPECAGSTALVAVLTQTHIIIANCGDSRAVLCRGKEALPLSTDHKVRHLFLVSEIVCWT | 135 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trme68510g00001 | 135 | SUPERFAMILY | PP2C-like | 1 | 126 | IPR036457 | - | |
| Trme68510g00001 | 135 | ProSiteProfiles | PPM-type phosphatase domain profile. | 1 | 135 | IPR001932 | - | |
| Trme68510g00001 | 135 | PANTHER | PROTEIN PHOSPHATASE | 1 | 123 | IPR015655 | GO:0004722|GO:0006470 | |
| Trme68510g00001 | 135 | CDD | PP2Cc | 1 | 122 | IPR001932 | - | |
| Trme68510g00001 | 135 | Pfam | Protein phosphatase 2C | 1 | 123 | IPR001932 | - | |
| Trme68510g00001 | 135 | Gene3D | - | 1 | 130 | IPR036457 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Trme68510g00001 | Trme-Chr68510 | 401 | 808 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trme68510g00001 | 1 | 121 | PP2C-type Phosphatase Gene Family | AT1G17550 | 48.361 | 3.51e-32 | 117 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trme68510g00001 | K14497 | - | gmx:100789207 | 148.673 |