Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme68504g00001 ATGATTATTCCTGGTCCGGATTCGGTTGGGATCTTTGCTATTTCACAAAGTGGTAGTGGAGTAGCAGCTCGAGCATGTGGTCTTGTTAGTTTAGAACCTACGAAGATTGCAGAGATCCTTAAAGATCGTTTATCTTGGTTTCGAGAATGTCGGAACCTAGAAGTTTTCACAATGTTTCCTGCCGGAAATGGAGGAACCGTTGAGCTTGTTTACACACAGACATATGCTCCAACAACGCTAGCTCCTGCCCGGGATTTCTGGACTCTGAGATACACTACAACTTTGGAGAACGGTAGTATTGTGGTCTGTGAGAGGTCCCTGTCCGGTTCTGGCACTGGCCCTAATCCGGCTGTTGCTGCTCAGTTTGTAAGGGCCGAAACACTCCCGAGTGGCTACTTGATTCGACCATGCGAT 414 0.4783 MIIPGPDSVGIFAISQSGSGVAARACGLVSLEPTKIAEILKDRLSWFRECRNLEVFTMFPAGNGGTVELVYTQTYAPTTLAPARDFWTLRYTTTLENGSIVVCERSLSGSGTGPNPAVAAQFVRAETLPSGYLIRPCD 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme68504g00001 138 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 4 138 IPR044830 GO:0003700
Trme68504g00001 138 SUPERFAMILY Bet v1-like 6 138 - -
Trme68504g00001 138 Pfam START domain 5 137 IPR002913 GO:0008289
Trme68504g00001 138 Gene3D - 11 138 IPR023393 -
Trme68504g00001 138 ProSiteProfiles START domain profile. 22 138 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme68504g00001 Trme-Chr68504 1 802 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme68504g00001 4 138 Homeobox Transcription Factor Family AT5G60690 86.667 2.45e-79 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme68504g00001 K09338 - gmx:100804870 261.536