Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme68449g00001 ATGGATCCCACTCTCACACGTGCTGACAGGTTGGTAGGGCAAGTTCTCGGAGAGGTTGGATCACTGCCTGATGTTTTTGTAGAGCTTGAGGTAAACTTTTTCTTGCTTCGACGGCTTCTTGGTGTCCGGACAAAAGGTTCCGAGAGACAAGGAAAAGTCTCAAAGCTGGTGAAAGCAGAAATGCTAATGTTGAACATAGGATCAATGTCAACAGGCGCCAGAGTGGTTGCTGTGAAGAATGACTTGGCAAAGTTGCAACTTACTTCCCCTGTGTGCACC 279 0.4767 MDPTLTRADRLVGQVLGEVGSLPDVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLVKAEMLMLNIGSMSTGARVVAVKNDLAKLQLTSPVCT 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme68449g00001 93 Gene3D Translation factors 9 93 - -
Trme68449g00001 93 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER 1 93 - -
Trme68449g00001 93 Pfam Initiation factor eIF2 gamma, C terminal 28 93 IPR015256 -
Trme68449g00001 93 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 21 93 IPR009001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme68449g00001 Trme-Chr68449 1 560 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme68449g00001 1 93 Eukaryotic Initiation Factors Gene Family AT1G04170 90.323 3.96e-52 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme68449g00001 K03242 - gmx:100805852 174.481