Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme68369g00001 ATGATGGATTTGGTCCTCCACCTGCTAAATGGAAAGGAACTTGTGACAAATATGTTAATTTCTCAGGCTGCAATAAGTAAYATCCCTATCCTTATGTACAWTATCAAGATCATTGGAGCCAAATACTTCAAACTTGATGGAAGGTCTGATCCATCTGATATATTATCTCCCATAGATGTGGAAGGCCATGGAACGCATACTGCATCAACAGCAGCAGGAAATATTGTCCCGAACGCAAGTCTGTTCGGATTAGCCAATGGCACGGCTCGTGGAGCGGTGCCTTCAGCTAGGTTGGCAATTTACAAAGTCTGCTGGACAGAGGATGGATGTGCTGATATGGACATACTTGCTGGATTTGAGGCTGCTATACATGACGGCGTGGATGTCATATCAGTTTCGTTAGGTGGAGGAAATGCAAATTATGCACAGGACTGTATAGCAATTGGTGCATTTCATGCCATGAGGAAAGGCATAATCACAGTCGCCTCTGCTGGAAATGGTGGTCCAACTATGGC 515 0.4447 MMDLVLHLLNGKELVTNMLISQAAISNIPILMYXIKIIGAKYFKLDGRSDPSDILSPIDVEGHGTHTASTAAGNIVPNASLFGLANGTARGAVPSARLAIYKVCWTEDGCADMDILAGFEAAIHDGVDVISVSLGGGNANYAQDCIAIGAFHAMRKGIITVASAGNGGPTMA 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme68369g00001 172 SUPERFAMILY Subtilisin-like 42 171 IPR036852 GO:0004252|GO:0006508
Trme68369g00001 172 Pfam Subtilase family 59 168 IPR000209 GO:0006508|GO:0008236
Trme68369g00001 172 Gene3D Peptidase S8/S53 domain 36 170 IPR036852 GO:0004252|GO:0006508
Trme68369g00001 172 ProSiteProfiles Serine proteases, subtilase domain profile. 1 172 - -
Trme68369g00001 172 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 36 170 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme68369g00001 Trme-Chr68369 1 602 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme68369g00001 36 170 Subtilisin-like Serine Gene Family AT4G00230 71.852 2.94e-60 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme68369g00001 - - vvo:131620061 267.7