Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme68237g00001 TGGGTGTTACACAATTGGAGTGATGATGATTGCATAAAGATACTCAAAAATTGCAAGAAGGCTATTTCAGGAAAAGGGAAAGGAGGAAAAGTGATTATCATAGATGTAGTCATAAATGAAAATCAAGATGAGCATGAAATGACAGAAGTAAAACTTTTACTTGATGTGGTTATGATGACCAGCCTCAATGGAAAAGAGAGAAATGAAAAGGAATGGAAACAACTTTTCTTACAAGCTGGCTTCAAATCTTACAAGATATTCCCCGCGTTTGGTTTTAGGTCTCTTATTGAGCTTTATCCTTAA 303 0.3498 WVLHNWSDDDCIKILKNCKKAISGKGKGGKVIIIDVVINENQDEHEMTEVKLLLDVVMMTSLNGKERNEKEWKQLFLQAGFKSYKIFPAFGFRSLIELYP 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme68237g00001 100 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 100 IPR016461 GO:0008168
Trme68237g00001 100 PANTHER O-METHYLTRANSFERASE 1 85 IPR016461 GO:0008168
Trme68237g00001 100 Gene3D Vaccinia Virus protein VP39 1 100 IPR029063 -
Trme68237g00001 100 Pfam O-methyltransferase domain 1 82 IPR001077 GO:0008171
Trme68237g00001 100 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 98 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme68237g00001 Trme-Chr68237 172 474 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme68237g00001 1 100 Monolignol Biosynthesis Gene Families AT1G51990 41.346 1.63e-18 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme68237g00001 K22588 - gmx:100819257 141.739