Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme68197g00001 CTTGACTCAATGCAGAAGATCAATGAGAAAACAGACATGTACAGTTTCGGCGTGATTCTTCTTGAGGTGCTGACAGGAAGGAAACCATTAGATCCAACTCTGCCAGGAGTTCCTTTGATTTCTCAGATGGCTCAATCTGTTGAGTAA 147 0.4286 LDSMQKINEKTDMYSFGVILLEVLTGRKPLDPTLPGVPLISQMAQSVE 48
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme68197g00001 48 ProSiteProfiles Protein kinase domain profile. 1 48 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme68197g00001 48 SUPERFAMILY Protein kinase-like (PK-like) 4 45 IPR011009 -
Trme68197g00001 48 Gene3D Transferase(Phosphotransferase) domain 1 1 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme68197g00001 Trme-Chr68197 103 535 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme68197g00001 3 36 Receptor kinase-like Gene Family AT4G26540 73.529 4.55e-13 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Trme68197g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme68197g00001 - - cam:101492613 66.6254