Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme68182g00001 GTTGTTGCAGCTGNTGGTTTTATGGGCAAAAGGCTAGACATTCCGAGGCATGTGAATCCTCAAGTGGCTGCCTTGATTGAGCTCTGCTGGTCTGCGGAACAAAAGAGGCGGCCTTCTTTCTCCTACATTATGAAATGTTTGCAGCAAATAATTGCTGATGCTAAAGTGTGA 171 0.4561 VVAAXGFMGKRLDIPRHVNPQVAALIELCWSAEQKRRPSFSYIMKCLQQIIADAKV 56
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme68182g00001 56 SUPERFAMILY Protein kinase-like (PK-like) 9 52 IPR011009 -
Trme68182g00001 56 Gene3D Transferase(Phosphotransferase) domain 1 1 55 - -
Trme68182g00001 56 Pfam Protein tyrosine and serine/threonine kinase 9 47 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme68182g00001 Trme-Chr68182 116 458 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme68182g00001 1 54 MAP Kinase Kinase Kinase AT5G03730 59.259 1.41e-16 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Trme68182g00001 PK_Tyr_Ser-Thr 3.7e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme68182g00001 K14510 - gsj:114370482 101.679