Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme68176g00001 ATGAATCAGAACCTTCTAAACACAACTCCTAGTTTGAATGAAACTAATCATTCTAGAGGCCAGTCCATTGATCTTGGACGAGGAAATGTTGCTACAAGTTCTGCTAGAAACTCAGATTTTGACCGTGGTCTGAGTCGAGCCTCTAGTTTCAGAAGCATTGTTTCAGATACTGATACTTGGGTTTATGATCAAAATTCTTTAAAGGATGCGCCACTAGCTTCTAAACTTGCGTCACCTAATAGACAGGAAAATTTTAACCTTGAGCTGGAAAAGTTGAGAATTGAACTAAGACATGTCCAAGGAATGCATGCAGTAGCTCAAACTGAGAACATCGATGCATCACGAAAGCTAAGTGAACTGAGCAAGAGGAGATCAGGAGAATCCATGAAAATGAAGGAGATTATTGCTAAGGAGGAGGTGGCTCAAGAATTAGCAAGACAAGAAATAGAGAAATATGAAGCTGCAGCAAGAGAAGCTGCA 480 0.4021 MNQNLLNTTPSLNETNHSRGQSIDLGRGNVATSSARNSDFDRGLSRASSFRSIVSDTDTWVYDQNSLKDAPLASKLASPNRQENFNLELEKLRIELRHVQGMHAVAQTENIDASRKLSELSKRRSGESMKMKEIIAKEEVAQELARQEIEKYEAAAREAA 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme68176g00001 160 MobiDBLite consensus disorder prediction 1 42 - -
Trme68176g00001 160 Coils Coil 135 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme68176g00001 Trme-Chr68176 1 764 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme68176g00001 50 159 U-box Gene Family AT5G61550 44.545 5.48e-21 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme68176g00001 - - gmx:100801699 212.231