Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme681489g00001 GCCGGATCCCATGGAGCTGGACTCAAGGTGCTTGGTATCTACGGCATGGGAGGAATGGGGAAGACAACCCTTGCCCGAGCTGTCTATAATTTCATTGCCCCTCAATTTGACACCTTTTGTTTTCTAGAAGATGTGAGAGAAAATTCAGCGAAACGCGGCTTAGTGCATCTTCAACAGACCCTTCTTGCTGGTATAGCTGTTGGGCAGAAGAAAAAGGACCTTCAATTAGCAAGTGTCAGTGAAGGAGTTCTG 252 0.4762 AGSHGAGLKVLGIYGMGGMGKTTLARAVYNFIAPQFDTFCFLEDVRENSAKRGLVHLQQTLLAGIAVGQKKKDLQLASVSEGVL 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme681489g00001 84 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 67 IPR027417 -
Trme681489g00001 84 Pfam NB-ARC domain 6 42 IPR002182 GO:0043531
Trme681489g00001 84 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 70 IPR044974 GO:0006952
Trme681489g00001 84 Gene3D - 2 83 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme681489g00001 Trme-Chr681489 2 253 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme681489g00001 8 54 WRKY Transcription Factor Family AT5G45050 42.553 1.14e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme681489g00001 - - mtr:11444105 127.872