Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme680g00001 ATGAATGGTTTCAGTGCAAGTTTGTCTCCTTTGGAGCTCGAGGCTCTAAAAAGCACGGCCGGATATATTTCATCCATAAAGGATTTACCTATCAAACCAGACACAACACACTCTCCTCAGTTCATTGGCCTAAATCCTGTTTCAGGAACTTGGCCCAGAACACAATACGGAAAAAATGTTATAATTGGCATGATAGACAGTGGAATTTGGCCAGAAAGTGAAAGCTTTAAAGATGATGACATGCCTAACGTCCCTTCGCGATGGAAAGGCCAATGTGAAAATGGTACTCAATTTGATCCTTCATTATGCAACAAAAAACTCATAGGAGCTCGATTCTTCAACAAAGGTTTGCTGGCAAATAATCCTAATATCAAAATAACCATGAACTCCACACGCGACATAGATGGTCATGGCACTCATACATCAACCACTGTGGCTGGAAGTAAAGTTGAGGGTGCATCCTACTTTGGATATGCCTCCGGATCAGCCATAGGCATTGCTCCACATGCTCATGTATCCATGTACAAGGTATTGTGGAAAGAAGGAGCATATGTATCTGATACAATAGCTGCAATTGATAGTGCAATAGAAGATGGTGTAGATGTTCTTTCATTATCATTGGGTTTCGACGAGGCAACTTTGTACGAAGACCCAATAGCTATAGCCACATTTGCAGCTATGGAGAAAAACATTTTTGTATCTACATCTGCAGGGAACAGAGGGCCAGTGCTTGAAACTCTGCACAACGGAACACCGTGGGTAATAACTGTGGCTGCTAGCACATTGGACCGTGAATTTCATGGCGATTTAACACTTGGTGATGGATCCATAGTTACTGGCTTGTCTCTCTATCCAGGGAACATTTCTTCAGAAAAAGTTCCAATGGTTTTCCTGAGCTCATGTGATAATTTGAAGGAACTCATCAAAGCTAGAAACAAGATAGTGGTATGCGAAGACAAGAATCGAACACTCGGTACTCAAGTGGATAACTTGGATAGAGCAAAAGTTGTTGGAGGTGTTTTCATATCAAATAGTAATGATGATATAACATATTACATTCAAACTAAGTTTCCATCTATTTTTTTGAATCCAATGAATGGAGAACTAGTCAAGGATTACATCAAATGCAACAATAGTAATCCAAAAGCAAGCATGACATTTAAGAAAACTATTTTAGGTACAAAACCAGCACCAATTGTGGATAGTTATAGTTCAAGAGGACCATCACATAGTTGTCCATTTGTGTTAAAACCAGACATCACAGCACCAGGAACACTAATCTTAGCTTCATGGCCTCAAACAGTTCCAGCAACAGAATTGCAATTCCAAAACAATCTCTTCAGCAACTTCAACTTGTTAAGTGGAACATCAATGTCATGTCCACACATTGCAGGTGTAGCAGCACTTTTAAAAGAAGCACATCCTTGTTGGAGCCCTGCAGCCATTAGATCAGCAATTATGACAACCTCGGACATATTAGACAACACAAAGGAACTC 1497 0.4015 MNGFSASLSPLELEALKSTAGYISSIKDLPIKPDTTHSPQFIGLNPVSGTWPRTQYGKNVIIGMIDSGIWPESESFKDDDMPNVPSRWKGQCENGTQFDPSLCNKKLIGARFFNKGLLANNPNIKITMNSTRDIDGHGTHTSTTVAGSKVEGASYFGYASGSAIGIAPHAHVSMYKVLWKEGAYVSDTIAAIDSAIEDGVDVLSLSLGFDEATLYEDPIAIATFAAMEKNIFVSTSAGNRGPVLETLHNGTPWVITVAASTLDREFHGDLTLGDGSIVTGLSLYPGNISSEKVPMVFLSSCDNLKELIKARNKIVVCEDKNRTLGTQVDNLDRAKVVGGVFISNSNDDITYYIQTKFPSIFLNPMNGELVKDYIKCNNSNPKASMTFKKTILGTKPAPIVDSYSSRGPSHSCPFVLKPDITAPGTLILASWPQTVPATELQFQNNLFSNFNLLSGTSMSCPHIAGVAALLKEAHPCWSPAAIRSAIMTTSDILDNTKEL 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme680g00001 499 ProSitePatterns Serine proteases, subtilase family, serine active site. 455 465 IPR023828 -
Trme680g00001 499 CDD Peptidases_S8_3 32 491 IPR034197 -
Trme680g00001 499 FunFam Subtilisin-like protease SBT1.5 59 271 - -
Trme680g00001 499 Gene3D Peptidase S8/S53 domain 59 496 IPR036852 GO:0004252|GO:0006508
Trme680g00001 499 PRINTS Subtilisin serine protease family (S8) signature 57 76 IPR015500 -
Trme680g00001 499 PRINTS Subtilisin serine protease family (S8) signature 133 146 IPR015500 -
Trme680g00001 499 PRINTS Subtilisin serine protease family (S8) signature 454 470 IPR015500 -
Trme680g00001 499 CDD PA_subtilisin_like 269 384 - -
Trme680g00001 499 Pfam Subtilase family 57 490 IPR000209 GO:0006508|GO:0008236
Trme680g00001 499 SUPERFAMILY Subtilisin-like 34 496 IPR036852 GO:0004252|GO:0006508
Trme680g00001 499 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 497 IPR045051 -
Trme680g00001 499 Gene3D - 263 392 - -
Trme680g00001 499 ProSiteProfiles Serine proteases, subtilase domain profile. 41 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme680g00001 Trme-Chr680 1 1792 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme680g00001 1 495 Subtilisin-like Serine Gene Family AT5G67090 49.507 2.14e-164 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme680g00001 - - psat:127132069 892.878