Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme68014g00001 ATGAGATTTATATATACTGGATCAGTTGATGTCACTCTTGAAATTGCTCAAGATCTCCTCCGAGCAGCTGATCAATATCTCTTAGAAGGGCTTAAGAGACTATGTGAATACACAATTGCACAGGATGTATCAGTGGAGAGTGTGTCAAGTATGTATGAACTTTCGGAAGCATTCAATGCTATATCATTGAGACACACATGCATACTTTTTATCTTGGAGCACTTCGATAAATTAAGTGCAATGCCAGGGTCTAAAATAAAATTTTACAGCCTATTATACGCAGTAATTAACAAGGAATGTCTTCACAATCACACTATTTCACCTTTGAGTAAAG 334 0.3623 MRFIYTGSVDVTLEIAQDLLRAADQYLLEGLKRLCEYTIAQDVSVESVSSMYELSEAFNAISLRHTCILFILEHFDKLSAMPGSKIKFYSLLYAVINKECLHNHTISPLSK 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme68014g00001 111 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 1 85 IPR044282 -
Trme68014g00001 111 SUPERFAMILY POZ domain 1 41 IPR011333 -
Trme68014g00001 111 Pfam BTB/POZ domain 1 41 IPR000210 GO:0005515
Trme68014g00001 111 Gene3D Potassium Channel Kv1.1; Chain A 1 81 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme68014g00001 Trme-Chr68014 8 783 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Trme68014g00001 BTB 1.1e-05 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme68014g00001 - - pvy:116135028 155.606