Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme67993g00001 ATGTTGTGGGAACCATTGAGCTTCATTAGCATAATTTTGCTACCAATTGTTGGGAATGCTGCAGAACATGCTGGTTCAATCATATTTGCTTACAAGAACAAATTGGACATATCTTTAGGTGTTGCTATGGGATCTGCAACTCAAATTTCTATGTTTGTGGTTCCATTGAGTGTGATTGTTGCATGGATAATGGGTATAAGAATGGATTTGGACTTCAACCTACTTGAAACTGGATGTCTTGGTTTTGCAATTATTGTTACAGCCTTCACTTTACAG 276 0.3732 MLWEPLSFISIILLPIVGNAAEHAGSIIFAYKNKLDISLGVAMGSATQISMFVVPLSVIVAWIMGIRMDLDFNLLETGCLGFAIIVTAFTLQ 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme67993g00001 92 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 5 92 IPR004713 GO:0006812|GO:0008324|GO:0016020
Trme67993g00001 92 Pfam Sodium/calcium exchanger protein 7 90 IPR004837 GO:0016020|GO:0055085
Trme67993g00001 92 Gene3D - 4 92 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme67993g00001 Trme-Chr67993 19 806 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme67993g00001 6 92 Antiporters AT3G51860 83.908 1.18e-44 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme67993g00001 K07300 - gmx:100802344 160.614