Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme67923g00001 TTGCACTGTAAACTGGTATTCAAGAAAAAGCTATTTCGTGAGTCAGATGAAGCCGTGACAGATCCAATGTTTCTGCAGTTGTCCTATGTACAATTGCAACATGATTATATTTTGGGTAATTACCCTGTTGGAAAAGATGATGCTGCTCAGCTTTCTGCATTACAAATCTTGGCTGAGATTGGATCTGTTAGCACACCCGAAACATGCGCTAACTGGAATTCACTTCTGGAGCGATTCCTTCCTAGACAACTTTCAATGACACGAGCAAAACGTGAATGGGAGTTTGATATTATATCTCGATATCATTCATTGAATGTCATGTGTAATACGGAGTGA 336 0.3958 MHCKLVFKKKLFRESDEAVTDPMFLQLSYVQLQHDYILGNYPVGKDDAAQLSALQILAEIGSVSTPETCANWNSLLERFLPRQLSMTRAKREWEFDIISRYHSLNVMCNTE 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme67923g00001 111 ProSiteProfiles FERM domain profile. 1 111 IPR000299 GO:0005856
Trme67923g00001 111 CDD FERM_B-lobe 25 104 IPR019748 -
Trme67923g00001 111 PANTHER MYOSIN VII, XV 2 105 - -
Trme67923g00001 111 SUPERFAMILY Second domain of FERM 8 107 IPR035963 -
Trme67923g00001 111 Gene3D - 11 111 IPR014352 -
Trme67923g00001 111 Pfam FERM central domain 16 107 IPR019748 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme67923g00001 1 104 Calmodulin-binding Proteins AT5G65930 77.885 1.02e-55 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme67923g00001 - - adu:107475586 194.897