Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme6791g00001 ATGCTTATAAGGCTCGGTGAAGCGGTGGGAGGGCGTTCTTCATGCAACTCTGGCAAAGGCAAGGGCAATCAGTCGCCAGTCAAATATGGCTTTAGCCTTGTTAAAGGGAAAGCCAACCATCCAATGGAGGACTATCACGTAGCAAAATTTGTCCATTTCAAAGGAAACGAGCTAGGACTATTTGCTATATACGATGGACACCTAGGAGACAGTGTACCATCATATTTGCAAAAGAATCTCTTTTCTAATATCTTGAAGGAAGACGACTTCTGGGATGATCCATTCATGTCAATTTCTAAAGCTTACGAGTCAACTGATCAGGCAATTCTTACTCACAGTCCTGATTTGGGGCGAGGAGGATCAACTGCCGTGACTGCAATTCTTATAAATAATCAGAAACTATGGGTTGCCAATGTTGGAGATTCACGAGCAGTTCTGTCAAGGGGAGGGGTAGCTGTACAGATGTCTACTGATCATGAACCTAATACGGAACGGGGAAGCATTGAGAATAGAGGTGGCTTTGTCTCAAACATGCCAGGTTCTTCAATTAACCCTGAGATCCATGTTTTGTTTCTTTTAGATGTTCATTGCTGA 594 0.4327 MLIRLGEAVGGRSSCNSGKGKGNQSPVKYGFSLVKGKANHPMEDYHVAKFVHFKGNELGLFAIYDGHLGDSVPSYLQKNLFSNILKEDDFWDDPFMSISKAYESTDQAILTHSPDLGRGGSTAVTAILINNQKLWVANVGDSRAVLSRGGVAVQMSTDHEPNTERGSIENRGGFVSNMPGSSINPEIHVLFLLDVHC 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme6791g00001 197 SUPERFAMILY PP2C-like 25 181 IPR036457 -
Trme6791g00001 197 CDD PP2Cc 27 194 IPR001932 -
Trme6791g00001 197 Gene3D - 11 191 IPR036457 -
Trme6791g00001 197 PANTHER PROTEIN PHOSPHATASE 23 178 IPR015655 GO:0004722|GO:0006470
Trme6791g00001 197 Pfam Protein phosphatase 2C 37 179 IPR001932 -
Trme6791g00001 197 SMART PP2C_4 24 195 IPR001932 -
Trme6791g00001 197 ProSiteProfiles PPM-type phosphatase domain profile. 28 197 IPR001932 -
Trme6791g00001 197 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme6791g00001 Trme-Chr6791 44 1108 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme6791g00001 7 180 PP2C-type Phosphatase Gene Family AT1G34750 73.563 2.06e-91 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme6791g00001 K17506 - gmx:100801722 322.783