Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme6788g00001 ATGGAAAATCACCAAAACCAAACCAAAAACCCAGACCAAGACCTAGACAACAAACAACACCACCAACACCAAGAGGGTTGGGGCACGTGGGAAGAGCTTTTACTAGCGTGCGCCGTCAACCGCCATGGTTTCAAAGACTGGGACACCGTCGCCATGGAGGTTCAGTCCCGAACCAACCGCCCTACGCTCCTCGCCACCGCACACCACTGCGAACAAAAATTTCACGATCTAAACCGTCGATTCACAGACGACGTTCCTCCGCCGCAACAGAATGGAGACTCCGCCGACGTTGATTCCGATCATGTTCCCTGGCTTGAGAAATTGCGTAAACAACGCGTTGCTGAGCTCCGGCGTGATGTCCAACGCAGCGACGTCTCCATTTTGTCGTTGCAGTTGCAGGTGAAGAGATTAGAGGAAGAGAAAGCGAAAGAGAATGACGGAGAAGAAGATAATAAACCAGATCTGGCGGTTACCGGCGAGGAACAGCTGCCGGAAAATGAAAAAACCGGTGGAGAAATGGAGGAGGCTGAACCGGCTAATTCCGAACCGGATATACGCCGGCTCGATGAAAGCACAACTAATACTGATAAACTGTTACCAACCACTGGAGAGGAATCGGACCGGGATAATCAATCGGTTAATGAGTCGAACTCAACCGGTTCGAGGTTTGATCCAGCGAAAACCGGTGACATTGATGTAAAGTTAGAAACCGGTCCGGTTCATGTTAAATCCGGTCCAAACGATCCGGTTCAAACCGGGAGGAAGAAAAAACCGATTGAAGAAGAATCGAATAACGGAAGCTATGATAACGAGGCTAAAGTTTTAACGTGCGAGTCGGTGCCTCCGAGTGAGGAGAGGAAAGTGGAAGGTGATTCGTCCGAGTTACATGATTCGGTGACTCGCTCGGAGGAGACAGGGACGAGAGAGAGTAGCGAGGTGCAGAGTTCTTCGAGTTTGTCGAAAACAAGGAAGACACGGCGGAGGAAGGATGTTTCCGGTGGAGATGTGGTGCCGGAGAATGAGGACGTGGCGATGGTGAAATCAGAACCGTTGGTTGGCGTGTTGGATATGATCAAAAGACATGAAAAATTTTCATTGTTTGAACGGCGTCTTGAAAAAAACCAG 1125 0.4987 MENHQNQTKNPDQDLDNKQHHQHQEGWGTWEELLLACAVNRHGFKDWDTVAMEVQSRTNRPTLLATAHHCEQKFHDLNRRFTDDVPPPQQNGDSADVDSDHVPWLEKLRKQRVAELRRDVQRSDVSILSLQLQVKRLEEEKAKENDGEEDNKPDLAVTGEEQLPENEKTGGEMEEAEPANSEPDIRRLDESTTNTDKLLPTTGEESDRDNQSVNESNSTGSRFDPAKTGDIDVKLETGPVHVKSGPNDPVQTGRKKKPIEEESNNGSYDNEAKVLTCESVPPSEERKVEGDSSELHDSVTRSEETGTRESSEVQSSSSLSKTRKTRRRKDVSGGDVVPENEDVAMVKSEPLVGVLDMIKRHEKFSLFERRLEKNQ 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme6788g00001 375 MobiDBLite consensus disorder prediction 165 193 - -
Trme6788g00001 375 SMART sant 23 80 IPR001005 -
Trme6788g00001 375 MobiDBLite consensus disorder prediction 139 156 - -
Trme6788g00001 375 Coils Coil 120 147 - -
Trme6788g00001 375 MobiDBLite consensus disorder prediction 139 341 - -
Trme6788g00001 375 MobiDBLite consensus disorder prediction 280 308 - -
Trme6788g00001 375 MobiDBLite consensus disorder prediction 1 24 - -
Trme6788g00001 375 MobiDBLite consensus disorder prediction 253 267 - -
Trme6788g00001 375 MobiDBLite consensus disorder prediction 79 100 - -
Trme6788g00001 375 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 13 372 - -
Trme6788g00001 375 Pfam Myb-like DNA-binding domain 27 72 IPR001005 -
Trme6788g00001 375 Gene3D - 17 76 - -
Trme6788g00001 375 CDD SANT 27 58 IPR001005 -
Trme6788g00001 375 SUPERFAMILY Homeodomain-like 23 59 IPR009057 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Trme6788g00001 Myb_DNA-binding 5.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme6788g00001 - - gmx:100779988 464.922