Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme67736g00001 GCTGATGATGAGGAGCTGGCACCTAATGCGAAGAAATTACATCCTGGAATTTCTTCTAGCATAATTACTGAGCTAACAGACTGTAATGCTGCTCTTTCACAGCAGAGGAAAAAGCGACAGATTTCTGCGACTTTGGCCCCTATTGATGCTATAGAGACATATACCCAGATATCTAGTCATCCCTTAAACAAAACAAACAGACAAGGCATTATATCTCTTGATATCCTTTATTCTAAGGACTTGATTGCAACTGGAAATATTGATACAAATGCTGTTATTTTTGACCGTCCATCAGGGCAAGTATTAGCTACACTCAGCGGTCACTCTAAAAAGGTCTTATTTTAG 345 0.3913 ADDEELAPNAKKLHPGISSSIITELTDCNAALSQQRKKRQISATLAPIDAIETYTQISSHPLNKTNRQGIISLDILYSKDLIATGNIDTNAVIFDRPSGQVLATLSGHSKKVLF 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme67736g00001 114 PANTHER PRE-MRNA-PROCESSING FACTOR 19 1 112 IPR038959 GO:0000398|GO:0000974|GO:0006281|GO:0061630
Trme67736g00001 114 SUPERFAMILY WD40 repeat-like 68 112 IPR036322 GO:0005515
Trme67736g00001 114 Gene3D - 44 113 IPR015943 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme67736g00001 1 112 U-box Gene Family AT2G33340 73.214 5.95e-54 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme67736g00001 K10599 - gmx:100800213 196.823