Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme677075g00001 ATCAAGTTTGCACACTTCACGGCTAACCAAGCGATTTTTGAGGCATTTGAAGCCGAAGAACGTGTTCATGTTATTGACCTTGATATTCTCCAGGGCTACCAATGGCCTGCTTTTATGCAGGCATTGGCTGCACGGTCCGGCGGTGCTCCGTTTCTTCGGATCACCGGTGTAGGACCGTGCATTGAATCAGTTAGGGAAACTGGACGATGTTTAACTGAGTTAGCTCATTCTCTTCGCATCCCCTTCGAGTTC 252 0.4881 IKFAHFTANQAIFEAFEAEERVHVIDLDILQGYQWPAFMQALAARSGGAPFLRITGVGPCIESVRETGRCLTELAHSLRIPFEF 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme677075g00001 84 ProSiteProfiles GRAS family profile. 1 84 IPR005202 -
Trme677075g00001 84 Pfam GRAS domain family 1 84 IPR005202 -
Trme677075g00001 84 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 84 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme677075g00001 Trme-Chr677075 1 252 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme677075g00001 1 84 GRAS Transcription Factor Family AT3G54220 55.952 2.66e-30 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trme677075g00001 GRAS 3.4e-35 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme677075g00001 - - rcu:8285306 166.007