Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme6762g00001 ATGAAAGTTATATCGTATAACTCTAAGTCTGAATTTAAGTGGAAGAAGCTTGATGAGTACATTAGCACACGCACTTATATCTCAGGGAACCGAGCTTCAATGGACGATCTCACTGTTTATGCAGCTTTGTCATCAGTTCCATCAGGTGAATTTGTGAATCTGGCTAGGTGGTACAAGCACATTAATGCTATTTTGAGAAGAATTTCTGGTGTTTATGGTGAGGGATCTGGTGGCACCGTGAAATCTTTTCTTGTGGCTGAAAAGGCTGTTGCCACCAGCGCGTTTGCTACCAGCATGTCTGCTGTTTCTAAAGTTATCCAGGAATACGTGCCTGTTAAAATGAGTTTGTCTGAATCTGGGTTGAAGAAGCTTAATGAGCACCTTCGCACACACACTTATATCTCAGGGAACCGAGCTTCAAACGATGATCTCACTGTTTTCGCAGTTTTGCCATCAGTTCCATCAAGTGGATTTGTGAATCTGGCTAGGTGGTACAAACACATTGATGATCTATTGATAAGAATTCCTGGTGTTTATGGTGAGGGATCTGGTGGCACCGTGAAATCTTCTCTTGTGGATGATACCAAGATGTCTGACTATTTTATTGGTATGGGATTTCCTGCACAGATGGTTTCCGAAGTAATTCTGGAATATGGTGAGGAAAATAAACATAAACTTCTTCAAGGGCTTGTCACATCATACCGATATCCTCCACTTTTAGAGCGAGCCTTGGCGCAACAGATGGTTGCTGCCTTGTGA 759 0.4229 MKVISYNSKSEFKWKKLDEYISTRTYISGNRASMDDLTVYAALSSVPSGEFVNLARWYKHINAILRRISGVYGEGSGGTVKSFLVAEKAVATSAFATSMSAVSKVIQEYVPVKMSLSESGLKKLNEHLRTHTYISGNRASNDDLTVFAVLPSVPSSGFVNLARWYKHIDDLLIRIPGVYGEGSGGTVKSSLVDDTKMSDYFIGMGFPAQMVSEVILEYGEENKHKLLQGLVTSYRYPPLLERALAQQMVAAL 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme6762g00001 252 Gene3D - 2 70 - -
Trme6762g00001 252 Gene3D - 94 173 - -
Trme6762g00001 252 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 10 94 - -
Trme6762g00001 252 SUPERFAMILY GST C-terminal domain-like 12 66 IPR036282 -
Trme6762g00001 252 SUPERFAMILY GST C-terminal domain-like 118 172 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme6762g00001 Trme-Chr6762 116 1674 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme6762g00001 15 98 Eukaryotic Initiation Factors Gene Family AT2G18110 56.471 6.09e-23 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme6762g00001 K03232 - ini:109191181 100.908