Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme6757g00001 ATGTGGTGGAGAGAGAGAATCGGATATGTGGGACAGGAACCGAAGTTATTCCGGATGGATATTAGCTCGAACATCAGATATGGATGTACCCGAGATGTAAAGCAGGAGGATATTGAGTGGGCTGCGACACAGGCATATGCTCATGACTTTATATCAGCACTTCCTAATGGTTATGAAACACTTGTGGATGACGATCTTTTGAGTGGCGGACAAAAGCAGCGAATTGCTATCGCTAGGGCCATTCTTAGGGACCCAAAAATATTGATCCTTGATGAAGCCACTAGTGCACTGGATGCCGAAAGTGAACATAATGTGAAGGGTGTTCTTCGATCGGTTAGAAGTGATTCTTCATCAAGGAGAAGTGTCATAGTCATTGCACACAGGCTCTCTACCATACAAGCTGCGGACAGGATTATTGTGATGGATAGGGGTCAAATTGTTGAGGATGGAAGTCACAGGGAACTTCTCTTGAAAGACGGTTTATATGCTCGGTTGACTAGAAAACAAGCTGATTCTATGGAATGA 525 0.4419 MWWRERIGYVGQEPKLFRMDISSNIRYGCTRDVKQEDIEWAATQAYAHDFISALPNGYETLVDDDLLSGGQKQRIAIARAILRDPKILILDEATSALDAESEHNVKGVLRSVRSDSSSRRSVIVIAHRLSTIQAADRIIVMDRGQIVEDGSHRELLLKDGLYARLTRKQADSME 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme6757g00001 174 Gene3D - 2 170 IPR027417 -
Trme6757g00001 174 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 2 168 IPR003439 GO:0005524
Trme6757g00001 174 PANTHER ABC TRANSPORTER B FAMILY 2 166 IPR039421 -
Trme6757g00001 174 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 169 IPR027417 -
Trme6757g00001 174 ProSitePatterns ABC transporters family signature. 67 81 IPR017871 GO:0005524|GO:0016887
Trme6757g00001 174 Pfam ABC transporter 2 95 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme6757g00001 Trme-Chr6757 212 1563 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme6757g00001 2 174 Calmodulin-binding Proteins AT2G36910 49.153 1.18e-41 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme6757g00001 - - gmx:100775951 296.975