Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme67531g00001 ATGGACGAAAAAGAGTCCCTTGAGCTTTTCAGTTGGCATGCCTTTAGACAACCGTCTCCAAGAGTCGACTTAAATGAATTCTCAAGGTACATGGTTGCCTATTGCAGAGGATTACCACTGGCTCTTGAAGTCTATGGTTCTTACATTTATCAGACGACAAAAGAAGAATGGATAAGTGAACTCTCAACACAAAAGAGAATAAGCTATGATGGTTTAATGAATGATATGGAAATTGATATATTTCTTGACATATGTTGTTTCTTTATTGGTAAGGACAGATTCTATGTTACAGAGATACTAAATGGCTGTGGACTTCATGCTGATATTGGAATAGCCATCCTCATAGAGCGGGGCTTCCTAAATGTTCAGAAGAATAACAAGCTTGCAATGCATGATTTGATAAGAGACATGGGAAGAGAAATAGTTCGCGGAAGTTCACCAACAGAACCTGGGAAGCGTAGTCGATTGTGGTTTCACGAGGATGTACATGATGTTTTGACCACAAATTCT 510 0.3902 MDEKESLELFSWHAFRQPSPRVDLNEFSRYMVAYCRGLPLALEVYGSYIYQTTKEEWISELSTQKRISYDGLMNDMEIDIFLDICCFFIGKDRFYVTEILNGCGLHADIGIAILIERGFLNVQKNNKLAMHDLIRDMGREIVRGSSPTEPGKRSRLWFHEDVHDVLTTNS 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme67531g00001 170 Gene3D - 1 79 IPR042197 -
Trme67531g00001 170 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 165 IPR044974 GO:0006952
Trme67531g00001 170 Pfam NB-ARC domain 2 59 IPR002182 GO:0043531
Trme67531g00001 170 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 74 IPR027417 -
Trme67531g00001 170 SUPERFAMILY "Winged helix" DNA-binding domain 66 166 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme67531g00001 Trme-Chr67531 234 743 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme67531g00001 1 157 WRKY Transcription Factor Family AT5G45050 36.686 1.87e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme67531g00001 - - tpra:123923836 252.292