Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme67479g00001 CATCAGATCCAGTCAAGTTTAGCTCCTCCATCAGCAGATCCACATGGCTATTGGCATGATTGTAGATTAAATTTTGCTAAATGTACTAGGCCACAAATCCAATTTCTGCAAGGTTTCAGGAATCACATGTTGAACTCTATTAAAGACTTCTCAAGATCAAACAAAAATGGATTGTTTATTAATTCGTGTTTCGCTCACTGCCAAACCGAGAGACAGGATACATGGTTTTCAGACAATTCTCCGGTTATTGGGAACAAGGTAATTGCTCTAGCTGTTGGAGACTGGTATTTCGACCGAGCAGGTGTTAAGGTCATTGATTGTCCATACCCTTGTGATAATACATGTCACCATCTGGTTTTCAGTTGA 366 0.3989 HQIQSSLAPPSADPHGYWHDCRLNFAKCTRPQIQFLQGFRNHMLNSIKDFSRSNKNGLFINSCFAHCQTERQDTWFSDNSPVIGNKVIALAVGDWYFDRAGVKVIDCPYPCDNTCHHLVFS 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme67479g00001 121 Pfam Pectinacetylesterase 2 100 IPR004963 GO:0016787
Trme67479g00001 121 PANTHER NOTUM-RELATED 2 117 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme67479g00001 Trme-Chr67479 2 614 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme67479g00001 2 120 Carbohydrate Esterase AT5G26670 75.630 6.02e-67 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme67479g00001 K19882 - gmx:100782401 240.736