Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme67457g00001 ATGGAGGTGGATGTGGATTGCAATTATGCATTTGGAAAGATGTTTTTGATTGGATCACAGCCACCATTTAAGGTGAAGGGGCTGTGGCTTTTCCATGGTCAAGAAATTTCACGGTTTATCATTGATGACTACGAATGGAAAAAGGTTGACATCTCTGACAAAGCTCAGGAAATGCTTGTCAATCAGATTATTGAAGGGATTCAACTATTTGAGGGAGAACCTGTTTTGTATGATAAGTTCTTTAATTGA 249 0.3815 MEVDVDCNYAFGKMFLIGSQPPFKVKGLWLFHGQEISRFIIDDYEWKKVDISDKAQEMLVNQIIEGIQLFEGEPVLYDKFFN 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme67457g00001 82 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 3 81 IPR044628 GO:0004364
Trme67457g00001 82 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 3 82 IPR036433 GO:0003746|GO:0006414
Trme67457g00001 82 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 1 82 IPR001662 GO:0003746|GO:0006414
Trme67457g00001 82 SUPERFAMILY eEF1-gamma domain 7 80 IPR036433 GO:0003746|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme67457g00001 Trme-Chr67457 302 550 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme67457g00001 2 81 Eukaryotic Initiation Factors Gene Family AT1G57720 53.488 1.23e-23 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme67457g00001 K03233 - mnt:21410711 105.145