Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme6733g00001 TGTTTGGCTCTTGGAACAAAGCGAATGGCTAGGTTGAATGCAATTGTGCGCTCTTTGCCATCCGTTGAAACCTTGGGCTGTACCACTGTAATTTGCAGTGACAAAACTGGGACTCTAACTACCAATATGATGTCAGTTGCAAAGATATGTGTTGTTGAAACCGCAAAAAGTAGTCCTTTTGTTACCGAATACGGTGTCAGTGGAACAACATATGCACCTGAAGGTAGAATCTTTGACAAGGAAGGGTTGCAGGTATGA 258 0.4302 CLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVETAKSSPFVTEYGVSGTTYAPEGRIFDKEGLQV 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme6733g00001 85 Gene3D - 1 60 - -
Trme6733g00001 85 SUPERFAMILY HAD-like 20 51 IPR036412 -
Trme6733g00001 85 PANTHER CALCIUM-TRANSPORTING ATPASE 1 56 - -
Trme6733g00001 85 SUPERFAMILY Calcium ATPase, transmembrane domain M 1 26 IPR023298 -
Trme6733g00001 85 FunFam Phospholipid-transporting ATPase IC 29 41 - -
Trme6733g00001 85 ProSitePatterns E1-E2 ATPases phosphorylation site. 34 40 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme6733g00001 Trme-Chr6733 858 1696 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme6733g00001 1 85 Primary Pumps ATPases(2) AT1G10130 78.824 1.00e-42 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme6733g00001 K05853 - gmx:100783509 149.058