Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme67324g00001 TTTGTCTTGCATACAATGTCGAGAACTGTACGCCCTGGTGAGTATGTTGAGACAGTTTGTGGGACTCCGTTATACATGGCTCCTGAAGTTCTTCAGTTCCAAAAATATGATTACAAGGCAGACATGTGGAGTGTTGGGGCAATTCTTTTTGAGCTTCTAAATGGTTATCCACCTTTTAATGGTAGAAATAATGTTCAGGTATTACGGTAA 210 0.4 FVLHTMSRTVRPGEYVETVCGTPLYMAPEVLQFQKYDYKADMWSVGAILFELLNGYPPFNGRNNVQVLR 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme67324g00001 69 Gene3D Transferase(Phosphotransferase) domain 1 5 69 - -
Trme67324g00001 69 Pfam Protein kinase domain 7 64 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme67324g00001 69 ProSiteProfiles Protein kinase domain profile. 1 69 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme67324g00001 69 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 6 68 IPR045269 GO:0004674|GO:0006914
Trme67324g00001 69 SUPERFAMILY Protein kinase-like (PK-like) 6 68 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme67324g00001 Trme-Chr67324 2 295 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme67324g00001 1 69 CBL-interacting serine-threonine protein kinases AT5G01810 45.714 4.51e-15 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Trme67324g00001 Pkinase 3.8e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme67324g00001 - - gmx:100787409 125.176