Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme6729g00001 GGTGGTAACTTCAGTTGCAACAAGAAGATAATCGGAGCACGATTTTACGGTCCTGGAGATGAGAGTGCTAGAGATTATTATGGCCATGGAACCCACACAGCATCAATAGCAGGTGGAAGAGAGGTGAAACATGTGAGTTTTGATGGTCTTGCAAAAGGCACTGTAAGAGGTGGAGTCCCATCTTCAAGGATTGCTGCATATAAAGTTTGTGGTGAAGATCGTATTTTATGCACTAGTGATTCAATGTTAGCTGCATTTGACGATGCCATTGCTGATGGAGTTGACGTCATCACCATTTCTATGGGTGGATTAAACGGCGATGAATTTGTGAATGATCCTATTGCCATTGGTTCTTTTCATGCAATGGAGAAAGGAATACTCACAACGCATGCTGCAGGAAATGGTGGTCCTAACCCGAAGAGTATTAAAAGTTTAGCACCTTGGTTATTTAGTGTTGCTGCAACTACCATTGATCGTCAATTCATTACTAAGCTCATTCTTGGAAATGGAAAGACTTTTATCGGTAGGTCAATCTATACTGGCCCTTCAAATGGAACCAAATTTCCAATAGCTGTACGTAATGCTAAAACTTGTTCCAATGGAGGAAACAAATACCCTAAAACGTGTGATTGTTTCGATCAAAGAATGGTGAAGGGTAAGCTTGTTTTGTGTGGATCAGGTGGAATATTTACTTCTAATACCGGTATAATTGGTTCAATATTTAATGTTACACACACTGAATTTGAACTTTCTTCTGTCACTTACAAGCCGTCACTTAATTTGGAAACAAATGACTTTGTTCAAGTTAAATCTTACACAAATTCCACTAAACACCCTATGGCTGAAATTTTAAAGAGTGAGATCTTCCATGACACCAATTCTCCAAAAGTTATACATTTCTCTTCTCGTGGCCCAAATCATTTGGTTCCAGAAATTATGAAACCAGATATAAGTGCTCCAGGAGTGAATATATTGGCTGCATATTCACCGTTTGGGCTATCCTCAGCCGATGTGGATGATAAGAGAAGGTTCAAATACAACCTATTATACGGAACCTCTATGGCATGTCCTCATGTTGCTGGAGTTGTTGCATATGTGAGATCATTTCATCCAAATTGGTCACCTGCAGCTATCAAATCTGCCATCATGACCACAGCTAAACCAGTCAAAGGTAATTATGATGATTTGGCAGGTGAATTTGCTTATGGTTCTGGGAATATTAATCCACAACAAGCCATTCACCCAGGACTTGTTTATGACATCACTAAGGAAGATTATGTGCAAATGCTTTGTAATTATGGTTATGATGCAAACAAAATTAAACAAATTAGTGGAGGTAATTCCAGTTGTCATGGAGCTCCTCAAAGATCCTTGTTGAAAGATATAAACTATCCTGCAATGGTGATTCCTATTGTGCCTGGTAATAAGAATTTCCATGTCAAGATTCATAGAATAGTCACAAACGTTGGTTTTCCCAACTCAACCTACAAGGCTACTCTCATCCATCATAATCCAAAAATCAAGATCAAAGTTGAACCAAAACTTCTCAAATTCAGATCATTAAACGAGACAAAATCATTTGTTGTCACTATTATTGGGGGAAAGAATTTAAATCAATCGGTGTTTTCCTCGTCACTGATTTGGTTTGATGGCACCCACAATGTCAAAAGTCCCATTATTGTGCAAATACTACCTCTATAG 1701 0.3845 GGNFSCNKKIIGARFYGPGDESARDYYGHGTHTASIAGGREVKHVSFDGLAKGTVRGGVPSSRIAAYKVCGEDRILCTSDSMLAAFDDAIADGVDVITISMGGLNGDEFVNDPIAIGSFHAMEKGILTTHAAGNGGPNPKSIKSLAPWLFSVAATTIDRQFITKLILGNGKTFIGRSIYTGPSNGTKFPIAVRNAKTCSNGGNKYPKTCDCFDQRMVKGKLVLCGSGGIFTSNTGIIGSIFNVTHTEFELSSVTYKPSLNLETNDFVQVKSYTNSTKHPMAEILKSEIFHDTNSPKVIHFSSRGPNHLVPEIMKPDISAPGVNILAAYSPFGLSSADVDDKRRFKYNLLYGTSMACPHVAGVVAYVRSFHPNWSPAAIKSAIMTTAKPVKGNYDDLAGEFAYGSGNINPQQAIHPGLVYDITKEDYVQMLCNYGYDANKIKQISGGNSSCHGAPQRSLLKDINYPAMVIPIVPGNKNFHVKIHRIVTNVGFPNSTYKATLIHHNPKIKIKVEPKLLKFRSLNETKSFVVTIIGGKNLNQSVFSSSLIWFDGTHNVKSPIIVQILPL 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme6729g00001 566 Pfam Subtilase family 20 403 IPR000209 GO:0006508|GO:0008236
Trme6729g00001 566 PRINTS Subtilisin serine protease family (S8) signature 350 366 IPR015500 -
Trme6729g00001 566 PRINTS Subtilisin serine protease family (S8) signature 25 38 IPR015500 -
Trme6729g00001 566 SUPERFAMILY Subtilisin-like 2 413 IPR036852 GO:0004252|GO:0006508
Trme6729g00001 566 Gene3D Peptidase S8/S53 domain 2 426 IPR036852 GO:0004252|GO:0006508
Trme6729g00001 566 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 3 561 IPR045051 -
Trme6729g00001 566 Pfam Fibronectin type-III domain 461 561 IPR041469 -
Trme6729g00001 566 ProSitePatterns Serine proteases, subtilase family, serine active site. 351 361 IPR023828 -
Trme6729g00001 566 Gene3D - 430 564 - -
Trme6729g00001 566 Gene3D - 158 290 - -
Trme6729g00001 566 ProSiteProfiles Serine proteases, subtilase domain profile. 1 413 - -
Trme6729g00001 566 CDD PA_subtilisin_like 165 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme6729g00001 Trme-Chr6729 1 1701 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme6729g00001 1 561 Subtilisin-like Serine Gene Family AT3G46850 49.913 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme6729g00001 - - psat:127076787 682.945