Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme67161g00001 GATTCACTTAAGAAGGTTTTGACACACAAAGGTCGATATGTGCAATACACTTTGTATGGAAACTTGTTTGAAGTGTCCTCAAAATATGTTCCTCCCCTTCGCCCTATCGGTAGAGGTGCTTATGGCATCGTCTGTGCTGCGGTTAATTCTGATACACATGAGGAAGTTGCTATCAAGAAGATTGGCAATACATTTGACAACATTATTGATGCTAAAAGGACTTTGAGGGAAATTAAGCTCCTTCGTCACATGGATCATGAAAATGTATTCTAA 273 0.3919 DSLKKVLTHKGRYVQYTLYGNLFEVSSKYVPPLRPIGRGAYGIVCAAVNSDTHEEVAIKKIGNTFDNIIDAKRTLREIKLLRHMDHENVF 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme67161g00001 90 Gene3D Phosphorylase Kinase; domain 1 6 90 - -
Trme67161g00001 90 SUPERFAMILY Protein kinase-like (PK-like) 12 89 IPR011009 -
Trme67161g00001 90 ProSitePatterns Protein kinases ATP-binding region signature. 36 60 IPR017441 GO:0005524
Trme67161g00001 90 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 28 89 - -
Trme67161g00001 90 FunFam Mitogen-activated protein kinase 15 90 - -
Trme67161g00001 90 Pfam Protein kinase domain 34 89 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme67161g00001 90 ProSiteProfiles Protein kinase domain profile. 30 90 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme67161g00001 Trme-Chr67161 3 474 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme67161g00001 2 89 MAP Kinase Gene Family AT4G01370 85.227 1.08e-48 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Trme67161g00001 Pkinase 1.1e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme67161g00001 - - cam:101500105 170.244