Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme67152g00001 GTTCAAGTTTGTGGGACTGTTGCTTATGTTGCACAAACGTCTTGGATTCAAAACGGGACAATTGAAGAAAACATTCTGTTTGGTTTACCAATGAACAGACAAAAGTACAATGAAGTTATCAGGGTTTGTTGCTTGGAGAAAGACTTAGAGATGATGGAATTTGGGGATCAGACAGAGATTGGAGAGCGTGGCATCAACCTCAGTGGAGGTCAGAAGCAGCGTATACAACTTGCTAGGGCTGTATACCAAGACTGTGATATATATCTTCTTGATGATGTCTTCAGTGCAGTCGATGCACATACCGGCACTGAAATATTTAAG 321 0.4143 VQVCGTVAYVAQTSWIQNGTIEENILFGLPMNRQKYNEVIRVCCLEKDLEMMEFGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGTEIFK 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme67152g00001 107 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 106 IPR027417 -
Trme67152g00001 107 Gene3D - 1 107 IPR027417 -
Trme67152g00001 107 FunFam Multidrug resistance associated protein, putative 31 99 - -
Trme67152g00001 107 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 4 107 - -
Trme67152g00001 107 Pfam ABC transporter 6 93 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme67152g00001 Trme-Chr67152 152 472 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme67152g00001 7 101 Calmodulin-binding Proteins AT2G36910 39.583 1.93e-14 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme67152g00001 - K05666 pop:7487778 210.305