Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme671256g00001 GTTTCTCATTGGTTCTGGTCCGGTGATGGTTGGGCTAGCGCAACCAACACCGGAAACCTTCTGTTCAGCACTGGAGTTATCGATTTTGCTGGCTCCGGTGTTGTTCATATGGTTGGTGGTATTGCTGGTCTCTGGGGAGCGCTGATTGAAGGTCCGCGAATCGGACGGTTCGATCATTCTGGTCGAGCCGTTACTCTTCGCGGACATAGCGCTTCCCTTGTTGTTCTTG 229 0.5284 VSHWFWSGDGWASATNTGNLLFSTGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDHSGRAVTLRGHSASLVVL 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme671256g00001 76 Pfam Ammonium Transporter Family 1 76 IPR024041 GO:0008519|GO:0016020|GO:0072488
Trme671256g00001 76 Gene3D Ammonium transporter AmtB like domains 1 76 IPR029020 -
Trme671256g00001 76 SUPERFAMILY Ammonium transporter 2 76 - -
Trme671256g00001 76 PANTHER AMMONIUM TRANSPORTER 1 76 - -
Trme671256g00001 76 ProSitePatterns Ammonium transporters signature. 28 53 IPR018047 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme671256g00001 Trme-Chr671256 27 255 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme671256g00001 1 76 Inorganic Solute Cotransporters AT4G13510 84.416 2.30e-37 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme671256g00001 K03320 - sspl:121796026 153.68