Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme67118g00001 GATGTTGTATGGAATCCTTCGGTCGAAAGACAGGCTATCAGCCGAGCGTATAGGATTGGACAGAAAAAGGTGGTATACACATACCATCTTCTCGCTGAAGGGACTACCGAGGCAGAAAAATATGGCAAACAGGCCGAAAAGGATCGGTTATCTGAGCTCCTTTTTTCAGCTAAAAATGCCACCGATAATGATGTGTCCAAGCGCCGTGCTGTGAACTTTGAAGATGAAGTTCTTGATAAGATGACTCGACATGAAAAGCTCATAGACATGTTCGTTAAGTGCGTCGTACTGAGGAAGGAGCGAGATTTGGTCTGA 315 0.4508 DVVWNPSVERQAISRAYRIGQKKVVYTYHLLAEGTTEAEKYGKQAEKDRLSELLFSAKNATDNDVSKRRAVNFEDEVLDKMTRHEKLIDMFVKCVVLRKERDLV 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme67118g00001 104 Gene3D - 1 99 IPR027417 -
Trme67118g00001 104 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 1 102 IPR044567 GO:0080188
Trme67118g00001 104 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 90 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme67118g00001 Trme-Chr67118 527 841 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme67118g00001 1 77 RAD5 or RAD16-like Gene Family AT5G05130 36.364 4.34e-08 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme67118g00001 K10875 - lja:Lj0g3v0068189.1 144.05