Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme67093g00001 TTTATTGGTGCGAAGTATCCACCGACTTTGCCGATAACTAATCTCCGCTGGAAAACCTGGCTGACCACCTTTATGGTTGTGTTGATTTCAGCTAGCATTGCAGTGGTTCCAGCAGCATTAAGAGTTCCTGATATTGAGCCTTGGTTTCATTTAGCACTTGTGGTTTTATTGAGTGGTTGCCCTTGTGCTCTTATCCTCTCCACACCTGTTGCAATCTTTTGTGCTCTCACAAAAGCTGCAATAAGTGGATTACTGTTGAAAGGTGGAGATTATCTTGAAACACTTTCCAGAATTAAGACAGTGGCTTTTGATAAAACAGGCACCATTACAAGAGGAGAGTTCATTGTAACAGATTTTAGTGCTGCAGATGACATCAACAATGAAACATTATTGTACTG 398 0.4095 FIGAKYPPTLPITNLRWKTWLTTFMVVLISASIAVVPAALRVPDIEPWFHLALVVLLSGCPCALILSTPVAIFCALTKAAISGLLLKGGDYLETLSRIKTVAFDKTGTITRGEFIVTDFSAADDINNETLLY 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme67093g00001 132 SUPERFAMILY HAD-like 90 117 IPR036412 -
Trme67093g00001 132 Gene3D - 93 112 IPR023214 -
Trme67093g00001 132 Gene3D - 113 129 IPR023299 GO:0000166
Trme67093g00001 132 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 23 132 - -
Trme67093g00001 132 ProSitePatterns E1-E2 ATPases phosphorylation site. 104 110 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme67093g00001 Trme-Chr67093 198 840 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme67093g00001 26 132 Primary Pumps ATPases AT2G19110 69.444 7.29e-47 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme67093g00001 K01534 - lja:Lj0g3v0042639.1 187.193