Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme6708g00001 ATGGATGCAAAAGAAGCCAATATGTCGAGTAAACACTTGAACCAATTGTTGTTGTCGTGGGAGAGAAATGAAGAGTCCCTATCACAAGAAAACGTTGAGGAGATTCTTGCTGCGCTTCAACCTCTTACCCAAGAACTTCAAAGTTTGGGTGTGAGAGGATATACAGGTGAACGTTTCCCACAATGGATGTCTAGTCCGTCTCTCAAATATTTAAATTCTTTAGAGCTTGTGGATTGTAAGAGTTGTTTGCACCTTCCAGAGTTGGGGAAACTGCCATCTCTCAAGAAGCTAACAATATCCAACATGATTCATATAATATATATAGACGAGAATTCAAATGATGATGGAGTTGTGGGATGTTTCATGGCACTAGAAGTTTTGTTGCTCGAAAAGCTGCCAAACCTGAAAAGGTTATCATTGGAGGATAGAGAAAACATGTTTTCACACCTTTCTACACTTCAAATAACAGAATGTCCAAAATTGTCGGGCTTGCCTTACCTTCCATCTTTGAATGATATGCGTATAAAGGGAAAATGCATCCAAAGTTTAATAAGTTCAATGCATAAACATCATAGTCTTGAAGCCATTCGATTTGCTAACAATGAAGAACTAATTTACTTTCCAGATGGAATGCTACAAAACCTCTCTTCTCTGAAGGTACTGGACTTTTTTGAGCTCCCCAAACTTGAGCAACTCCCAACTTTAATTTTTAACCTTCATTCTGTCCAAGAAATATATATTACCGGTTGTAGTAGCCTCAAGTCATTGCCAGATGAAGTATTACAAGGATTGAACTCTCTTAAGATATTAGATATTGTGAGGTGCCCAAAGTTCAATTTGTCAGCAAGTTTTCAGCACCTAACTTGTCTCGAGAAAATGATGATTGAGAGCTCCTTAGAAATTGAAGCTTTACATGAGACTTTACAACATATGACTGCCCTTCAATCGTTAATATTATGCGATCTTCCAAACCTTGCATCTCTGCCTGACTGGTTTGGAAACCTTGGTTTGCTGCACGAATTAATTATTTCTAAGTGTCCGAAGTTGAGGTGTCTTCCAATGAGCATTCAATGCCTTACTCGGCTTAAAACTTTGAAAATTTACGGGTGCAGTGAGCTAGGGAAAAGCTGTCAAAAAGAAACCGGTGAGAATTGGCAAAATATAGCCCATGTGCAGGATATTGAAATACAAAACTGGGTACAACACACAGTCAGAGGAGGATTATCAGGATATCCTTTTGCAAAGTTATTTTAG 1254 0.3836 MDAKEANMSSKHLNQLLLSWERNEESLSQENVEEILAALQPLTQELQSLGVRGYTGERFPQWMSSPSLKYLNSLELVDCKSCLHLPELGKLPSLKKLTISNMIHIIYIDENSNDDGVVGCFMALEVLLLEKLPNLKRLSLEDRENMFSHLSTLQITECPKLSGLPYLPSLNDMRIKGKCIQSLISSMHKHHSLEAIRFANNEELIYFPDGMLQNLSSLKVLDFFELPKLEQLPTLIFNLHSVQEIYITGCSSLKSLPDEVLQGLNSLKILDIVRCPKFNLSASFQHLTCLEKMMIESSLEIEALHETLQHMTALQSLILCDLPNLASLPDWFGNLGLLHELIISKCPKLRCLPMSIQCLTRLKTLKIYGCSELGKSCQKETGENWQNIAHVQDIEIQNWVQHTVRGGLSGYPFAKLF 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme6708g00001 417 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 260 378 - -
Trme6708g00001 417 Gene3D Ribonuclease Inhibitor 120 247 IPR032675 -
Trme6708g00001 417 SUPERFAMILY L domain-like 29 389 - -
Trme6708g00001 417 Gene3D Ribonuclease Inhibitor 3 115 IPR032675 -
Trme6708g00001 417 Gene3D Ribonuclease Inhibitor 261 388 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme6708g00001 Trme-Chr6708 20 1273 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme6708g00001 150 298 WRKY Transcription Factor Family AT4G12020 26.000 2.15e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme6708g00001 - - mtr:11425422 699.508