Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme67034g00001 CATATTGTAGCCTCACGTGGAGATCTTCTGAAGGTCATTCGTCTCTATGAATATGGGGCTGATCCCAATATTAAAGACTTAGATGGAAACACAGTGTTACATGTCGCGGTGGTTGCAAATAAAATTGACATTGTCCGTTGCCTTTTGGAACATGGTGCTAATGGTGACATAAAGAACACTGGTGGATCCACTCCAATTGAACTAGCAACTTTGCCCCACCAAAAAGACATTCAAAATTTGCTAAGTACGAATGGTTAG 258 0.4109 HIVASRGDLLKVIRLYEYGADPNIKDLDGNTVLHVAVVANKIDIVRCLLEHGANGDIKNTGGSTPIELATLPHQKDIQNLLSTNG 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme67034g00001 85 PANTHER ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 60 3 79 IPR039323 -
Trme67034g00001 85 ProSiteProfiles Ankyrin repeat region circular profile. 28 59 - -
Trme67034g00001 85 ProSiteProfiles Ankyrin repeat profile. 28 60 IPR002110 GO:0005515
Trme67034g00001 85 Pfam Ankyrin repeats (many copies) 17 69 IPR002110 GO:0005515
Trme67034g00001 85 SUPERFAMILY Ankyrin repeat 1 83 IPR036770 -
Trme67034g00001 85 SMART ANK_2a 28 59 IPR002110 GO:0005515
Trme67034g00001 85 Gene3D - 1 85 IPR036770 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme67034g00001 4 85 Ion Channels AT2G25600 39.024 5.55e-13 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme67034g00001 - K25138 cpea:104394694 71.6329