Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme66901g00001 ATGTCAACAACCATGGAGCTTCCAGATTGTTACTATCCCATACCACCAATTAACATCACCCCATGTATACCAACACCAAATCACACTCTCCATCTCAATAATCTTGATGATGAATTGTACAAGAAATTTATACCTTATGTGTATATATTCAAGAAATCTGTAGGAATAGATACCTTGAAGTCTTCCCTATCAAGAGTTTTGGTGGATTACTACCCTTTTGCTGGTAGGTTTAGGACAAGCACTGAGGATGAAAACAAGTTGGTGGTGGATTGTAATGGAGAAGGTGCTTTGTTTGTTGAGGCTTCAATGGATATCACTGTTGAAGAATTACTCAAATCTTCTATGATGCCAAATAGTTCATGGAAGAAGATCATCTGTAATGTGGAATCTAAAAATTCTATCGATACTCCTCTTCTTGTAATCCAG 426 0.3685 MSTTMELPDCYYPIPPINITPCIPTPNHTLHLNNLDDELYKKFIPYVYIFKKSVGIDTLKSSLSRVLVDYYPFAGRFRTSTEDENKLVVDCNGEGALFVEASMDITVEELLKSSMMPNSSWKKIICNVESKNSIDTPLLVIQ 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme66901g00001 142 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 19 142 - -
Trme66901g00001 142 Pfam Transferase family 19 142 - -
Trme66901g00001 142 Gene3D - 14 142 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme66901g00001 Trme-Chr66901 184 609 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme66901g00001 19 142 Monolignol Biosynthesis Gene Families AT5G48930 29.231 9.91e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme66901g00001 - - cam:101511955 184.496