Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme6688g00001 ATGGAAGAAACATTTGTTCCCTTCCGCGGGATTAAGAATGACTTCAAAGCAAGAATTGTGTGCTATAAACAAGATTGGACCAGCGGATTCCGCGCAGGTGCAAGGATCCTTGCACCAACTACATACATATTTTTTGCTTCGGCAATTCCTGTTATTTCTTTTGGGGAGCAACTGGAGAGAAGTACAGATGGAACTCTCACTGCTGTTCAAACTCTTGCATCAACTGCACTATGTGGTATTATCCACTCAATTATTGGAGGCCAACCTCTCCTCATACTAGGTGTAGCTGAGCCAACAGTTCTGATGTATACATTCATGTACAATTTCGCAAAGGATCGTGAGGATTTAGGACACAAACTATTCCTGCCTTGGACTGGATGGGTGTGTGTTTGGACTGCACTGTTGCTCTTCTTGCTGGCCGTTCTCGGTGCATGCTCCATAATCAACCGATTCACACGCCTTACTGGTGAACTATTTGGTCTGCTAATTGCAATGCTCTTTATGCAGCAGGCTATTAAGGTTCACCTTCTGTTAACTGTTACCTAA 546 0.4396 MEETFVPFRGIKNDFKARIVCYKQDWTSGFRAGARILAPTTYIFFASAIPVISFGEQLERSTDGTLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVLMYTFMYNFAKDREDLGHKLFLPWTGWVCVWTALLLFLLAVLGACSIINRFTRLTGELFGLLIAMLFMQQAIKVHLLLTVT 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme6688g00001 181 FunFam probable boron transporter 2 18 60 - -
Trme6688g00001 181 Gene3D Helical hairpin bin 18 60 - -
Trme6688g00001 181 PANTHER ANION EXCHANGE PROTEIN 2 174 IPR003020 GO:0005452|GO:0006820|GO:0016020
Trme6688g00001 181 Pfam HCO3- transporter family 7 173 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme6688g00001 Trme-Chr6688 1027 1940 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme6688g00001 1 173 Antiporters AT3G62270 83.815 2.40e-102 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme6688g00001 K24194 - var:108330573 331.257