Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme66807g00001 GGTTTCAGGAAAATTGATGCGGATCACTGGGAGTTTGCGAATGAGAACTTCATCAGGGGTCAAAAGCATTTGTTGAAGAATATACGTAGAAGGAAACATCCACATGGTGCAGATCAGCAAAAAGCATTGCCACAGAAAGACAATCGCGGTGATGAACAATCACAAGAAGCAACGAATCACAGCCTTTGGAAAGAAGTTGAGAATCTCAAATCTGATAGAAACTCCCTCACACAAGAGTTGGTCAAACATAAGCAGCGCCTAGAATCTTCTGAGAGTAAGTTGCTTCTATTGAGTGATCGTCTTGAAGGAATGGAGAAGCATCAGCAGCAGATGCTATCATTCTTGGTCATGGTTGTGCAGTGCCCTGGATTCCTGGCTCAGCTGCTTCACCCTAAGGAAAATAATTGGCGTTTGGCTGATGCAGGGAATGTGTTGTACCAAGATGA 446 0.4395 GFRKIDADHWEFANENFIRGQKHLLKNIRRRKHPHGADQQKALPQKDNRGDEQSQEATNHSLWKEVENLKSDRNSLTQELVKHKQRLESSESKLLLLSDRLEGMEKHQQQMLSFLVMVVQCPGFLAQLLHPKENNWRLADAGNVLYQD 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme66807g00001 148 Gene3D - 1 32 IPR036388 -
Trme66807g00001 148 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 1 137 IPR027725 -
Trme66807g00001 148 SUPERFAMILY "Winged helix" DNA-binding domain 2 31 IPR036390 -
Trme66807g00001 148 MobiDBLite consensus disorder prediction 31 60 - -
Trme66807g00001 148 Coils Coil 66 93 - -
Trme66807g00001 148 MobiDBLite consensus disorder prediction 37 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme66807g00001 Trme-Chr66807 397 842 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme66807g00001 1 142 HSF AT1G67970 51.748 2.19e-42 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme66807g00001 K09419 - gmx:100813694 234.187