Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme66789g00001 ATGGCATCAATGTCAGCATCTGGTTCATGGAGTGCTAAGGACAACAAAGCATTTGAAAGGGCATTAGCTGTTTTTGATAAGGACACACCTGATCGTTGGTCCAATGTTGCTCAAGCTATTGGTGGAGGGAAGACTCCTGAAGATGTTAAGAGACACTATGAACTTCTTCTTAGGGATATTAGGCACATTGAATCAGGTCAAGATGAGAAACCTGAAGCTCCAGTGACCAAATGGTGTTAA 240 0.425 MASMSASGSWSAKDNKAFERALAVFDKDTPDRWSNVAQAIGGGKTPEDVKRHYELLLRDIRHIESGQDEKPEAPVTKWC 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme66789g00001 79 CDD SANT 9 57 IPR001005 -
Trme66789g00001 79 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 2 71 IPR044636 GO:0003700
Trme66789g00001 79 ProSiteProfiles SANT domain profile. 5 61 IPR017884 -
Trme66789g00001 79 SUPERFAMILY Homeodomain-like 8 65 IPR009057 -
Trme66789g00001 79 ProSiteProfiles Myb-like domain profile. 8 57 IPR001005 -
Trme66789g00001 79 Pfam Myb-like DNA-binding domain 8 54 IPR001005 -
Trme66789g00001 79 Gene3D - 2 69 - -
Trme66789g00001 79 SMART sant 6 59 IPR001005 -
Trme66789g00001 79 FunFam Transcription factor SRM1 2 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme66789g00001 Trme-Chr66789 7 783 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Trme66789g00001 Myb_DNA-binding 1.2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme66789g00001 - - gmx:100804396 124.405