Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme667697g00001 TGGCTTAGTGGTGCAAAGGAATTGGGAACTGAATCAGCTCCAGCTCCAAGTTTTTTGCCAACTGAGGAAAAGAAAGAAGATGAAGACTTTGCCGTTCCAGCTGAAGAGGACCAGAATACATGTGCCTTATGTGGAGAGTGTTTCGATGAATTTTACAGTGATGAGACAGAGGATTGGATGTACAGAGGAGGTGTTTACCTTAATGCGCCCAATGGAATAATAACAGCCGGCATGGACAG 239 0.4477 WLSGAKELGTESAPAPSFLPTEEKKEDEDFAVPAEEDQNTCALCGECFDEFYSDETEDWMYRGGVYLNAPNGIITAGMD 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme667697g00001 79 MobiDBLite consensus disorder prediction 1 30 - -
Trme667697g00001 79 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 1 72 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme667697g00001 Trme-Chr667697 16 254 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme667697g00001 1 70 C2H2 Transcription Factor Family AT4G04885 68.493 1.50e-29 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme667697g00001 K14400 - tpra:123894024 149.828