Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme6674g00001 ATGTCATTTGTTGGTTCCAATGTTGCTGGAATGCACTTATATTCAAGAGCAGCAACTAAAGGGAAACGTGTTCAGTCTAATACGGGGGCCAAAAATCATGCAATTGTCATGCCAGGTGCAAATGTTGATTTTACTATAAATGCTTTAGTTGCTGGTGGTTTTGGAGCTGCTGGACAGAGGTGCATGGCTCTCAGCACAGTTATTTTCGTGGGAGGCTCGCAACATGGTATCTCGTACTCCATTCTGTTTTGA 252 0.4325 MSFVGSNVAGMHLYSRAATKGKRVQSNTGAKNHAIVMPGANVDFTINALVAGGFGAAGQRCMALSTVIFVGGSQHGISYSILF 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme6674g00001 83 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 2 29 IPR016162 GO:0016491
Trme6674g00001 83 Pfam Aldehyde dehydrogenase family 2 68 IPR015590 GO:0016491
Trme6674g00001 83 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 54 65 IPR016160 GO:0016491
Trme6674g00001 83 SUPERFAMILY ALDH-like 2 70 IPR016161 GO:0016491
Trme6674g00001 83 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 30 68 IPR016163 GO:0016620
Trme6674g00001 83 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 2 75 IPR010061 GO:0004491
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme6674g00001 1 74 Aldehyde Dehydrogenase Gene Family AT2G14170 72.973 3.30e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme6674g00001 K00140 - gmx:100811544 131.339