Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme66642g00001 ATGTTCATTGAGGAAGTCATGGAGATGGTAGAATTGAACTTACTGAGGCAAGCTTTGGTTGGTTTACCTGGTGTGAGTGGTCTCTCAACCGAACAACGCAAGAGGTTGACTATTGCAGTTGAGCTGGTGGCTAATCCATCCATAATATTCATGGATGAACCAACTTCTGGTTTAGATGCAAGAGCTGCTGCAATTGTTATGAGAACAGTTAGAAACACAGTGGACACAGGAAGAACAGTTGTTTGTACAATCCATCAACCAAGCATCGACATTTTTGAAGCCTTTGATGAGGTGATATTTGATTGA 306 0.415 MFIEEVMEMVELNLLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDEVIFD 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme66642g00001 101 Pfam ABC transporter 3 56 IPR003439 GO:0005524
Trme66642g00001 101 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 1 99 - -
Trme66642g00001 101 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 97 IPR027417 -
Trme66642g00001 101 FunFam Uncharacterized protein 33 100 - -
Trme66642g00001 101 Gene3D - 2 101 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme66642g00001 Trme-Chr66642 221 526 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme66642g00001 28 88 Calmodulin-binding Proteins AT2G36910 34.426 6.07e-06 41.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme66642g00001 K08711 - cit:102607577 181.415