Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme66639g00001 ATGAAGTGGGTGATGAATGAAGTTCTAAGGCTCTATCCATCAGCACCAAATGTTCAAAGGCAAGCTAGAGAAGACATTAAATTTGATAATTTAACAATTCCCAACGGGACCAACATGTGGATCGACGTTGTCGCGATGCACCACGACCCGTCGTTGTGGGGAGAAAATGTGAATGAGTTTCGACCAGAAAGGTTCATGGACGATGTAAATGGTGGATGCAACCAAAAAATGGGATACTTACCTTTTGGGTTTGGAGGAAGAATGTGTATTGGTAGAAACTTGAGTTTCATGGAGTATAAGATAGTGTTAACCCTTCTTCTCTCTAGATTTAGTTTTAAAATTTCCCCAACTTATATCCATTCACCTTCTTTTATGCTCTCACTAAGGCCAGCTTATGGACTCCCTCTAATAGTTCAGTCCCTTTAG 426 0.4061 MKWVMNEVLRLYPSAPNVQRQAREDIKFDNLTIPNGTNMWIDVVAMHHDPSLWGENVNEFRPERFMDDVNGGCNQKMGYLPFGFGGRMCIGRNLSFMEYKIVLTLLLSRFSFKISPTYIHSPSFMLSLRPAYGLPLIVQSL 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme66639g00001 141 PRINTS P450 superfamily signature 14 27 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme66639g00001 141 PRINTS P450 superfamily signature 89 100 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme66639g00001 141 PRINTS P450 superfamily signature 80 89 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme66639g00001 141 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 132 - -
Trme66639g00001 141 SUPERFAMILY Cytochrome P450 1 138 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme66639g00001 141 Pfam Cytochrome P450 2 117 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme66639g00001 141 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 82 91 IPR017972 GO:0005506|GO:0016705
Trme66639g00001 141 PRINTS E-class P450 group I signature 89 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme66639g00001 141 PRINTS E-class P450 group I signature 79 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme66639g00001 141 PRINTS E-class P450 group I signature 43 67 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme66639g00001 141 PRINTS E-class P450 group I signature 2 20 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme66639g00001 141 Gene3D Cytochrome P450 1 141 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme66639g00001 Trme-Chr66639 148 573 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme66639g00001 1 141 Cytochrome P450 AT5G52400 71.631 3.14e-73 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme66639g00001 - - gmx:100810679 266.544