Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme66579g00001 GTCAGAGTCTGCAGAGAGAAGACTACTGATCATGTATACGCAATGAAAAAACTAAAGAAATCAGAGATGCTTCGCAGAGGCCAGGTTGAACACGTCAAAGCGGAAAGGAATCTCCTCGCAGAGGTTGACAGCAATTGCATAGTCAAACTTTACTGTTCTTTCCAGGATGATGAGTATCTTTATCTTATTATGGAGTATCTACCGGGTGGAGATATGATGACTCTACTTATGAGAAAGGATACCTTGA 247 0.413 VRVCREKTTDHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTL 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme66579g00001 82 Pfam Protein kinase domain 1 80 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme66579g00001 82 SUPERFAMILY Protein kinase-like (PK-like) 1 80 IPR011009 -
Trme66579g00001 82 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 82 - -
Trme66579g00001 82 ProSiteProfiles Protein kinase domain profile. 1 82 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme66579g00001 82 Gene3D Phosphorylase Kinase; domain 1 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme66579g00001 Trme-Chr66579 481 844 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme66579g00001 1 82 AGC Kinase Gene Family AT3G23310 95.122 7.84e-51 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Trme66579g00001 Pkinase 2.7e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme66579g00001 K08790 - cave:132165963 166.777