Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme66510g00001 ATGGCACATGTCGAATCATTGTTATGCACTGGATCAGCTGATGTACGGATTATTGGTATTTGGGGTATGGGTGGTATAGGCAAGACAACCATTGCAGAGGCTATATATACAAAAGTCTCTTCTCAATACGAGGGATGCTACTTCGCTGCCAATGTGAGGGAAAATTGGGAATATTCTAGAAAAAACGAGTTACGGACAAAACTTCTGGCTGGTGTATTAGGGGACCAAAACCTGGATATTAGCACCCCTACTATAAGTTCCACTTTTGTTGTAGGAAGGCTTCGACGTAAAAAGCTTCTCATTGTTCTCGATGACATAAGTGATTCCAAACAAATAGAATATCTTGTTGGCGAGAAAGATTGGTTTGGACCTGGTAGTCGAATCATAGTGACGACCAGAAATAAAGAAGTGTTTAACAGTGGAGTTGATGAATTATACCAAGTGAAGGTATTGAATTCTCATGAATCACTAAAGCTTTTTAGCTTGAATGCCTTTCAACAAGACCATCCAATGAGGGAATACCAACACTTGTCAGACAGGGCAGTAGATTATGCTAAGGGCA 562 0.4039 MAHVESLLCTGSADVRIIGIWGMGGIGKTTIAEAIYTKVSSQYEGCYFAANVRENWEYSRKNELRTKLLAGVLGDQNLDISTPTISSTFVVGRLRRKKLLIVLDDISDSKQIEYLVGEKDWFGPGSRIIVTTRNKEVFNSGVDELYQVKVLNSHESLKLFSLNAFQQDHPMREYQHLSDRAVDYAKG 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme66510g00001 187 Pfam NB-ARC domain 7 172 IPR002182 GO:0043531
Trme66510g00001 187 PRINTS Disease resistance protein signature 17 32 - -
Trme66510g00001 187 PRINTS Disease resistance protein signature 93 107 - -
Trme66510g00001 187 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 187 IPR027417 -
Trme66510g00001 187 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 187 IPR044974 GO:0006952
Trme66510g00001 187 Gene3D - 1 145 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme66510g00001 Trme-Chr66510 1 562 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme66510g00001 6 187 WRKY Transcription Factor Family AT4G12020 40.437 8.24e-37 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme66510g00001 - - tpra:123891409 351.673