Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme6631g00001 ATATCTGGGACGGCATTGGTTCTGGATGAAATCATCAACCATGTTCAAACTCTACAACGTCAAGTGGAGATCTTATCAATGAAACTGGCAGCAGTTAACCCAAGAATTGATTTCAACTTAGACAGGTTATTGGCCTCTGATGGGTCATCTTTAATGGACAGTAATTTACCTAGCATGGTTACACCTCTCGTGTGGCCAGAAATCCCACTCAACAATAACAGACCGCATTATCAACAGCAATGGCAATTCGATGCATTCCATCAACCACTTTGGGGAAGGGAAGAAGACAACCATCATTTCATGACTCCGGAAAACTCACTTTTGAGTTATGACTCCCCGGCTAATTCAGGTAGATTATAG 360 0.4222 ISGTALVLDEIINHVQTLQRQVEILSMKLAAVNPRIDFNLDRLLASDGSSLMDSNLPSMVTPLVWPEIPLNNNRPHYQQQWQFDAFHQPLWGREEDNHHFMTPENSLLSYDSPANSGRL 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme6631g00001 119 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 108 IPR024097 GO:0006355
Trme6631g00001 119 Coils Coil 8 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme6631g00001 Trme-Chr6631 60 1812 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme6631g00001 1 99 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G57800 58.879 1.21e-35 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme6631g00001 - - gmx:100814124 211.846